Nishi, Y., Ji, H., Wong, W.H., McMahon, A.P., and Vokes, S.A. (2008). Modeling the Spatio-Temporal Network that Drives Patterning in the Vertebrate Central Nervous System. BBA - Gene Regulatory Mechanisms. Manuscript in press.

Vokes, S.A., Ji, H., Wong, W.H., and McMahon, A.P. (2008). Whole Genome Identification and Characterization of Gli Cis-Regulatory Circuitry in Hedgehog-Mediated Mammalian Limb Development. Genes Dev. 22: 2651-2663. [ Harvard Newsletter ]  [ Link to Paper ]

Vokes, S.A., Ji, H., McCuine, S., Tenzen, T., Giles, S., Zhong, S., Longabaugh, W.J.R., Davidson, E.H., Wong, W.H., and McMahon, A.P. (2007). Genomic Characterization of Gli-Activator Targets in Sonic Hedgehog-Mediated Neural Patterning. Development 134: 1977-1989. [ Harvard Newsletter ]  [ Link to Paper ]  [ Biotapestry Model ]

Ji, H., Vokes, S.A. and Wong, W.H. (2006). A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors. Nucleic Acids Res. 34: e146. [ Link to Paper ]

Yuen, C.M., Rodda, S.J., Vokes, S.A., McMahon, A.P. and Liu, D.R. (2006). Control of transcription factor activity and osteoblast differentiation in mammalian cells using an evolved small-molecule-dependent intein. J. Am. Chem. Soc. 128: 8939-8946.

Nybakken, K., Vokes, S.A., Lin, T.Y., McMahon, A.P. and Perrimon, N. (2005). A genome-wide RNA interference screen in Drosophila cells for novel components of the Hh signaling pathway. Nat. Genetics. 37:1323-1332.

Vokes, S.A. and A.P. McMahon (2004). Hedgehog signaling: iguana debuts as a nuclear gatekeeper. Curr. Biol. 14:R668-R670.

Vokes, S.A., Yatskievych, T.A., Heimark, R.L., McMahon, J., McMahon, A.P., Antin, P.B. and P.A. Krieg (2004). Hedgehog signaling is essential for endothelial tube formation during vasculogenesis. Development 131: 4371-4380. [ Link to Paper ]

Vokes, S.A. and P.A. Krieg (2002). Molecular vascular embryology. In PanVascular Medicine (eds. Lanzer, P., Topol, E.J.), pp. 18-35. New York, Springer-Verlag.

Gerber, W.V., Vokes, S.A., Zearfoss, N.R. and P.A. Krieg (2002). A role for the RNA-binding protein, hermes, in the regulation of heart development. Dev. Biol. 247:116-126. *Co-first author

Vokes, S.A. and P.A. Krieg (2002). Endoderm is required for vascular endothelial tube formation, but not for angioblast specification. Development 129:775-785. [ Link to Paper ]

Garriock, R.J., Vokes, S.A., Small, E.M., Larson, R. and P.A. Krieg (2001). Developmental expression of the Xenopus Iroquois-family homeobox genes, Irx4 and Irx5. Dev. Genes Evol. 211:257-260.

Small, E.M., Vokes, S.A.*, Garriock, R.J., Li, D. and P.A. Krieg (2000). Developmental expression of the Xenopus Nkx2-1 and Nkx2-4 genes. Mech. Dev. 96:259-262.
*Co-first author

Vokes, S.A. and P.A. Krieg (2000). Gdf16, a novel member of the growth/differentiation factor subgroup of the TGF- superfamily, is expressed in the hindbrain and epibranchial placodes. Mech. Dev. 95:279-282.

Vokes, S.A., Reeves, S., Torres, A. and S.M. Payne (1999). The aerobactin iron transport system genes in Shigella flexneri are present within a pathogenicity island. Mol. Microbiol. 33:63-73.